STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3895PFAM: carbohydrate kinase FGGY; KEGG: gka:GK1941 gluconokinase; Belongs to the FGGY kinase family. (524 aa)    
Predicted Functional Partners:
Krad_0003
TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rha:RHA1_ro03668 phosphogluconate dehydrogenase (decarboxylating).
 
 
 0.931
Krad_0597
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: dra:DR1910 thermoresistant gluconokinase.
     
 0.930
Krad_1524
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.916
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 0.914
Krad_3894
TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pde:Pden_2931 gluconate transporter.
 
  
 0.908
Krad_1491
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: aau:AAur_0566 gluconolactonase.
  
 
 0.906
Krad_4229
KEGG: tfu:Tfu_2315 putative secreted protein.
    
 0.905
Krad_0801
PFAM: protein of unknown function DUF718; KEGG: nfa:nfa32910 hypothetical protein.
  
  
 0.645
Krad_3893
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mkm:Mkms_5416 GntR domain protein.
     
 0.566
Krad_2980
PFAM: ribulose-phosphate 3-epimerase; KEGG: aau:AAur_1824 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 
 0.556
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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