STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3963PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO2796 putative cellobiose transport permease. (326 aa)    
Predicted Functional Partners:
Krad_3962
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO7557 putative sugar transport integral membrane protein.
 0.995
Krad_3964
PFAM: extracellular solute-binding protein family 1; KEGG: sma:SAV5256 putative sugar binding secreted protein.
 
  0.992
Krad_3564
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 multiple sugar transport system permease protein.
 0.980
Krad_3566
PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_0934 putative solute binding lipoprotein.
 
  0.964
Krad_0916
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aau:AAur_0929 putative sugar ABC transportor, ATP-binding protein.
 
 0.955
Krad_2093
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mkm:Mkms_2603 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.931
Krad_1116
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_2541 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 0.914
Krad_3565
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0935 multiple sugar transport system permease protein.
  
  
 
0.906
Krad_2167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA0400 putative transport system permease protein.
 
 0.887
Krad_0963
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO7505 putative integral membrane binding-protein-dependent transport protein.
 
 0.886
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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