STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3974Hypothetical protein; KEGG: sco:SCO3959 possible integral membrane protein. (249 aa)    
Predicted Functional Partners:
Krad_3975
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_4447 ABC transporter related.
 
 
 0.974
Krad_3977
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3956 putative ABC transporter ATP-binding protein.
 
 
 0.973
Krad_3976
Hypothetical protein; KEGG: sma:SAV4249 putative integral membrane protein.
 
     0.959
Krad_0396
KEGG: sma:SAV6106 ABC transporter ATP-binding protein.
  
 
 0.574
Krad_0579
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5395 putative ABC transporter ATP-binding subunit.
  
 
 0.574
Krad_0580
KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein.
  
 
 0.574
Krad_0672
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_6766 ABC transporter, ATP-binding protein, NodI family protein.
  
 
 0.574
Krad_1977
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx08750 ABC transporter, ATP-binding protein.
  
 
 0.574
Krad_1978
KEGG: sco:SCO6361 integral membrane protein.
  
 
 0.574
Krad_1979
KEGG: sco:SCO6361 integral membrane protein.
  
 
 0.574
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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