STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3977PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3956 putative ABC transporter ATP-binding protein. (315 aa)    
Predicted Functional Partners:
Krad_3974
Hypothetical protein; KEGG: sco:SCO3959 possible integral membrane protein.
 
 
 0.973
Krad_3976
Hypothetical protein; KEGG: sma:SAV4249 putative integral membrane protein.
 
 
 0.968
Krad_2954
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa18740 putative branched-chain amino acid transporter ATP-binding protein.
     
0.900
Krad_1290
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro02589 ABC quaternary amine transporter, ATP-binding component.
 
    
0.872
Krad_3975
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_4447 ABC transporter related.
 
    
0.819
Krad_2094
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: msm:MSMEG_3270 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.677
Krad_1084
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdn:Sden_2367 ABC transporter related.
     0.657
Krad_3978
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rxy:Rxyl_1765 pyridine nucleotide-disulphide oxidoreductase dimerisation region.
       0.552
Krad_0747
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5448 putative ABC transporter.
  
  0.535
Krad_3828
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rba:RB5871 cell division protein FtsH homolog.
  
     0.480
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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