STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4043PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_3232 major facilitator superfamily MFS_1. (459 aa)    
Predicted Functional Partners:
Krad_2698
PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_5329 major facilitator superfamily MFS_1.
  
     0.725
Krad_4042
KEGG: art:Arth_3409 hypothetical protein.
       0.661
Krad_4044
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sma:SAV7235 LysR-family transcriptional regulator.
  
    0.569
Krad_3441
KEGG: sco:SCO7121 secreted protein.
  
     0.410
Krad_3328
PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: art:Arth_3063 arsenical pump membrane protein.
 
   
 0.409
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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