STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4064KEGG: sma:SAV2403 hypothetical protein. (130 aa)    
Predicted Functional Partners:
rbpA
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.775
Krad_3093
Putative transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein.
  
     0.773
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
     0.769
Krad_3263
KEGG: aau:AAur_2218 hypothetical protein.
  
     0.762
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.760
Krad_3289
KEGG: art:Arth_1603 integral membrane protein.
  
     0.759
Krad_3046
PFAM: protein of unknown function DUF349; KEGG: art:Arth_2295 protein of unknown function DUF349.
  
     0.752
Krad_3338
KEGG: ace:Acel_0882 hypothetical protein.
  
     0.748
Krad_1584
KEGG: nca:Noca_3675 hypothetical protein.
  
     0.744
Krad_0627
PFAM: Phosphoglycerate mutase; KEGG: nca:Noca_0500 phosphoglycerate mutase.
  
     0.737
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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