STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4079Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: nca:Noca_4625 purine catabolism PurC domain protein. (523 aa)    
Predicted Functional Partners:
Krad_1423
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: tfu:Tfu_0691 helix-turn-helix, fis-type.
  
     0.761
Krad_4080
Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sma:SAV7504 magnesium or manganese-dependent protein phosphatase.
       0.732
Krad_4081
KEGG: pac:PPA0727 putative Zn-dependent hydrolase.
       0.732
Krad_4078
PFAM: aminotransferase class-III; KEGG: sco:SCO5655 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.725
Krad_2073
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: sco:SCO6169 regulatory protein.
  
     0.678
Krad_4484
Putative transcriptional regulator, PucR family; KEGG: sma:SAV2725 transcriptional regulator.
  
     0.647
Krad_4082
KEGG: lxx:Lxx17640 branched-chain amino acid aminotransferase.
 
     0.619
Krad_2311
PFAM: regulatory protein LuxR; KEGG: msm:MSMEG_6828 transcriptional regulator.
  
     0.439
Krad_4076
KEGG: tfu:Tfu_1922 solute-binding protein.
 
     0.435
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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