STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4092PFAM: extracellular solute-binding protein family 1; KEGG: jan:Jann_3701 extracellular solute-binding protein, family 1. (445 aa)    
Predicted Functional Partners:
Krad_4090
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_4088 binding-protein-dependent transport systems inner membrane component.
 
 
 0.945
Krad_4091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4157 binding-protein-dependent transport systems inner membrane component.
 
 
 0.902
Krad_4089
PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase.
       0.773
Krad_0301
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6355 putative integral membrane sugar transport protein.
 
 
 0.766
Krad_2090
PFAM: extracellular solute-binding protein family 1; KEGG: msm:MSMEG_3266 maltose/maltodextrin-binding protein.
  
     0.719
Krad_0302
PFAM: binding-protein-dependent transport systems inner membrane component.
 
   0.618
Krad_2092
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2602 binding-protein-dependent transport systems inner membrane component.
 
 
 0.575
Krad_4402
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0952 binding-protein-dependent transport systems inner membrane component.
 
 
 0.559
Krad_4016
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro03452 ABC sugar transporter, permease component.
 
 
 0.550
Krad_4401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0953 binding-protein-dependent transport systems inner membrane component.
 
 
 0.534
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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