STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4102KEGG: art:Arth_0625 hypothetical protein. (163 aa)    
Predicted Functional Partners:
Krad_4139
KEGG: nfa:nfa45010 hypothetical protein.
  
     0.775
Krad_4461
KEGG: nca:Noca_3724 putative phosphodiesterase.
 
     0.665
Krad_4101
KEGG: rxy:Rxyl_2373 membrane protein-like protein.
       0.636
Krad_0814
KEGG: art:Arth_3106 hypothetical protein.
 
     0.581
Krad_0365
Hypothetical protein.
  
     0.579
Krad_3358
KEGG: sco:SCO0759 hypothetical protein.
 
     0.573
Krad_3359
SMART: zinc finger CDGSH-type domain protein; KEGG: nfa:nfa48540 hypothetical protein.
  
     0.476
purC
TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; KEGG: nca:Noca_4337 phosphoribosylaminoimidazole-succinocarboxamide synthase.
       0.460
purD
TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; KEGG: sma:SAV4149 putative phosphoribosylglycinamide synthetase; Belongs to the GARS family.
       0.460
Krad_4098
KEGG: mkm:Mkms_2285 conserved hypothetical protein.
       0.439
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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