STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4127TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: msm:MSMEG_1180 N-carbamoyl-L-amino acid hydrolase. (407 aa)    
Predicted Functional Partners:
Krad_4267
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: fal:FRAAL1416 D-hydantoinase (dihydropyrimidinase) (DHPase).
 
 
 0.940
Krad_4266
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: msm:MSMEG_3555 hydrolase.
    
  0.901
Krad_4451
TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sma:SAV3494 atrazine chlorohydrolase.
    0.858
Krad_4128
PFAM: FAD dependent oxidoreductase; KEGG: fal:FRAAL4450 putative monomeric sarcosine oxidase (MSOX).
 
  
 0.829
Krad_3928
PFAM: aldehyde dehydrogenase; KEGG: nca:Noca_3529 betaine-aldehyde dehydrogenase.
    
 0.804
Krad_2077
Allantoinase; PFAM: amidohydrolase; KEGG: art:Arth_3693 allantoinase.
 
 
 0.696
Krad_4129
Hypothetical protein.
       0.509
Krad_2078
Serine--pyruvate transaminase; PFAM: aminotransferase class V; KEGG: pat:Patl_2052 aminotransferase, class V.
 
    0.501
Krad_2081
PFAM: Amidase; KEGG: fal:FRAAL4260 putative glutamyl-tRNA(Gln) amidotransferase, subunit A; Belongs to the amidase family.
 
   
 0.418
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 
 0.417
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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