STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4145PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100265 putative permease component of ABC transporter. (306 aa)    
Predicted Functional Partners:
Krad_4146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4376 putative transmembrane component of ABC transporter.
   0.969
Krad_4147
PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL100263 putative substrate-binding component of ABC transporter.
 
 
 0.940
Krad_4401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0953 binding-protein-dependent transport systems inner membrane component.
 
 0.889
Krad_0916
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aau:AAur_0929 putative sugar ABC transportor, ATP-binding protein.
 
 0.874
Krad_2093
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mkm:Mkms_2603 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.874
Krad_0386
PFAM: binding-protein-dependent transport systems inner membrane component.
   0.871
Krad_4091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4157 binding-protein-dependent transport systems inner membrane component.
 
 
 0.871
Krad_3460
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_0554 ABC transporter permease protein, putative.
   0.865
Krad_0964
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_0686 putative ABC-type sugar transport systems, permease components.
 
 
 0.864
Krad_2091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_3267 transporter.
   0.863
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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