STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4173KEGG: fal:FRAAL3624 putative ABC transporter. (390 aa)    
Predicted Functional Partners:
Krad_4174
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjk:jk0429 ABC-type uncharacterized transport system ATPase component.
  
 0.975
Krad_4178
TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; TOBE domain protein; KEGG: mkm:Mkms_0055 DNA binding domain, excisionase family.
 
     0.852
Krad_4175
PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: msm:MSMEG_2014 molybdenum import ATP-binding protein ModC.
       0.762
Krad_4176
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.762
Krad_4177
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_3748 molybdenum ABC transporter, periplasmic molybdate-binding protein.
       0.762
Krad_4172
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tfu:Tfu_2449 tRNA/rRNA methyltransferase.
       0.731
Krad_4179
PFAM: Ankyrin; KEGG: sco:SCO1414 ankyrin-like protein.
       0.590
Krad_4171
PFAM: oxidoreductase domain protein; KEGG: sco:SCO0735 oxidoreductase.
  
    0.542
Krad_4098
KEGG: mkm:Mkms_2285 conserved hypothetical protein.
      0.462
Krad_4180
PFAM: SNARE associated Golgi protein; KEGG: sco:SCO3411 possible membrane protein.
       0.404
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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