STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4236PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx14230 ABC transporter, ATP-binding protein. (494 aa)    
Predicted Functional Partners:
Krad_4235
PFAM: cobalt transport protein; KEGG: art:Arth_3864 cobalt transport protein.
 
 0.997
Krad_4237
KEGG: lxx:Lxx14240 ABC transporter, permease protein.
 
  
 0.965
Krad_0857
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
    0.591
Krad_2913
PFAM: cobalt transport protein; KEGG: nca:Noca_3351 cobalt transport protein.
  
 
 0.541
Krad_3860
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ret:RHE_PB00035 probable oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.474
Krad_2994
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mxa:MXAN_4664 oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.464
Krad_2995
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bja:blr3344 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.461
Krad_1125
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: cef:CE1884 putative peptide ABC transporter peptide-binding protein.
  
  
 0.451
Krad_2912
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_3227 ABC transporter-related protein.
 
 
0.419
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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