STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4281PFAM: amidohydrolase; Amidohydrolase 3; KEGG: msm:MSMEG_1297 hydroxydechloroatrazine ethylaminohydrolase. (451 aa)    
Predicted Functional Partners:
Krad_2070
PFAM: Transthyretin; KEGG: mul:MUL_0457 hypothetical protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.830
Krad_2075
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rha:RHA1_ro04506 probable xanthine dehydrogenase molybdenum binding subunit.
 
  
 0.733
Krad_2071
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.722
Krad_2069
KEGG: rha:RHA1_ro04511 hypothetical protein.
 
     0.666
Krad_2074
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mva:Mvan_5280 molybdopterin dehydrogenase, FAD-binding.
 
  
 0.640
Krad_4279
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: fal:FRAAL3168 ferric uptake regulation protein (ferric uptake regulator); Belongs to the Fur family.
       0.636
Krad_4280
PFAM: Ferritin Dps family protein; KEGG: msm:MSMEG_3242 starvation-inducible DNA-binding protein or fine tangled pili major subunit; Belongs to the Dps family.
       0.636
Krad_2076
PFAM: protein of unknown function DUF182; KEGG: sco:SCO6174 hypothetical protein.
 
  
 0.613
Krad_4282
PFAM: HpcH/HpaI aldolase; KEGG: aau:AAur_3005 putative citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
       0.590
Krad_2077
Allantoinase; PFAM: amidohydrolase; KEGG: art:Arth_3693 allantoinase.
 
  
 0.488
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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