STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4309PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nfa:nfa33850 putative lipase. (274 aa)    
Predicted Functional Partners:
Krad_4308
KEGG: rme:Rmet_4616 hypothetical protein.
       0.773
Krad_2667
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bja:bll4989 putative esterase.
  
     0.686
Krad_4311
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: art:Arth_4444 cation diffusion facilitator family transporter.
  
    0.555
Krad_4310
PFAM: regulatory protein ArsR; transcriptional regulator TrmB; Helix-turn-helix type 11 domain protein; KEGG: nfa:nfa26300 putative transcriptional regulator.
       0.553
Krad_1541
PFAM: Carboxylesterase type B; KEGG: sco:SCO0321 carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
 
  
 0.462
acpP
Phosphopantetheine-binding; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.404
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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