STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4317KEGG: mxa:MXAN_6701 hypothetical protein. (193 aa)    
Predicted Functional Partners:
Krad_4318
PFAM: regulatory protein TetR; KEGG: fal:FRAAL4318 putative TetR family transcriptional regulator.
 
     0.600
Krad_0880
KEGG: art:Arth_3011 hypothetical protein.
  
     0.531
Krad_3786
KEGG: fra:Francci3_0782 hypothetical protein.
  
     0.476
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.472
Krad_1365
KEGG: art:Arth_2513 secreted protein.
  
     0.429
Krad_3785
PFAM: TadE family protein; KEGG: aau:AAur_2659 hypothetical protein.
  
     0.423
Krad_1199
PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; KEGG: sma:SAV6084 anthranilate/para-aminobenzoate synthase component I.
 
    0.407
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: art:Arth_1490 phenylalanyl-tRNA synthetase, beta subunit.
     
 0.401
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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