STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4434KEGG: sco:SCO0296 transcriptional regulator. (203 aa)    
Predicted Functional Partners:
Krad_4435
PFAM: stress protein; KEGG: sma:SAV5804 tellurium resistance protein.
       0.773
Krad_4433
PFAM: major facilitator superfamily MFS_1; KEGG: fra:Francci3_2282 major facilitator superfamily MFS_1.
 
     0.717
Krad_3324
PFAM: regulatory protein TetR; KEGG: fal:FRAAL0027 putative transcriptional regulator (HTH-type).
  
     0.656
Krad_2037
PFAM: regulatory protein TetR; KEGG: fra:Francci3_2758 transcriptional regulator, TetR family.
  
     0.574
Krad_4432
KEGG: rha:RHA1_ro01831 probable DNA polymerase III.
       0.430
Krad_2118
PFAM: regulatory protein MarR; KEGG: bat:BAS0733 transcriptional regulator, MarR family.
  
     0.409
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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