STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4474KEGG: mkm:Mkms_2276 conserved hypothetical protein. (188 aa)    
Predicted Functional Partners:
Krad_4472
KEGG: rha:RHA1_ro01917 hypothetical protein.
       0.809
Krad_4473
KEGG: mkm:Mkms_2277 conserved hypothetical protein.
       0.786
Krad_4475
KEGG: mkm:Mkms_2275 conserved hypothetical protein.
       0.780
Krad_4471
KEGG: mkm:Mkms_2279 conserved hypothetical protein.
       0.657
Krad_4470
PFAM: protein of unknown function DUF322; KEGG: mkm:Mkms_2280 protein of unknown function DUF322.
       0.652
Krad_4476
KEGG: rha:RHA1_ro06302 hypothetical protein.
       0.449
Krad_4468
Hypothetical protein.
       0.445
Krad_4469
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: nfa:nfa23350 putative sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.437
Krad_4467
KEGG: aau:AAur_0672 hypothetical protein.
       0.416
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.