STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4477PFAM: GAF domain protein; ANTAR domain protein; KEGG: mkm:Mkms_0253 response regulator receiver and ANTAR domain protein. (245 aa)    
Predicted Functional Partners:
Krad_4493
KEGG: aau:AAur_1975 hypothetical protein.
 
     0.734
Krad_2957
PFAM: Extracellular ligand-binding receptor; KEGG: msm:MSMEG_3247 branched-chain amino acid ABC transporter substrate-binding protein.
  
 
 0.570
Krad_1168
KEGG: tfu:Tfu_0618 hypothetical protein.
  
     0.536
Krad_4478
Putative PAS/PAC sensor protein; PFAM: GAF domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; KEGG: sco:SCO7759 DNA-binding protein.
     
 0.494
Krad_4270
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mav:MAV_1440 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.437
Krad_2961
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: nca:Noca_3022 glutamate synthase (ferredoxin).
  
  
 0.404
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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