STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4496KEGG: sma:SAV4300 hypothetical protein. (717 aa)    
Predicted Functional Partners:
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.932
Krad_4495
PFAM: NUDIX hydrolase; KEGG: art:Arth_4158 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
       0.819
Krad_0464
Hypothetical protein.
 
     0.696
Krad_4494
TIGRFAM: metal dependent phophohydrolase; tRNA adenylyltransferase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sma:SAV4299 putative RNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.670
Krad_1213
TIGRFAM: Anti-sigma factor RshA; KEGG: tfu:Tfu_0549 anti-sigma factor.
 
    0.666
Krad_3813
KEGG: art:Arth_2710 hypothetical protein.
  
     0.665
Krad_3061
KEGG: sco:SCO1524 hypothetical protein.
 
     0.594
Krad_1279
KEGG: tfu:Tfu_2396 putative cellulose-binding protein.
 
    0.504
Krad_2974
KEGG: tfu:Tfu_1082 hypothetical protein.
  
     0.504
Krad_2898
KEGG: nca:Noca_2575 hypothetical protein.
  
     0.492
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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