STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_4497TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: art:Arth_4159 integral membrane protein MviN. (570 aa)    
Predicted Functional Partners:
Krad_4500
PFAM: coagulation factor 5/8 type domain protein; KEGG: tfu:Tfu_3105 hypothetical protein.
 
    0.934
Krad_0077
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3060 FHA domain protein.
  
 
 
 0.893
Krad_2928
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.727
Krad_3096
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: sco:SCO1384 hypothetical protein.
  
 
 
 0.714
Krad_3289
KEGG: art:Arth_1603 integral membrane protein.
  
     0.570
Krad_4498
PFAM: NLP/P60 protein; KEGG: ace:Acel_2144 NLP/P60 protein.
  
    0.569
Krad_3093
Putative transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein.
  
     0.534
Krad_0074
PFAM: cell cycle protein; KEGG: nca:Noca_0025 cell cycle protein; Belongs to the SEDS family.
 
  
 0.525
Krad_3422
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: lxx:Lxx14720 DNA polymerase III, delta subunit.
 
  
 0.510
Krad_1582
PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: sma:SAV2231 putative ribonuclease D.
 
    0.483
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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