STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutC2Histidine utilization repressor; Annotated by: sma3s; COG2188. (253 aa)    
Predicted Functional Partners:
hutI
Imidazolone-5-propionate hydrolase; Annotated by: sma3s; COG1228.
 
  
 0.670
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.621
hutH
Histidine ammonia-lyase; Annotated by: sma3s; COG2986.
 
  
 0.590
AMG74855.1
Transcriptional regulator, GntR family; Annotated by: sma3s; COG2186.
  
  
 0.519
guaA
GMP synthase glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP.
     
 0.515
AMG76135.1
Cupin; Annotated by: sma3s; COG1917.
  
  
 0.496
hutF
N-formimino-L-glutamate deiminase; Annotated by: sma3s; COG0402.
 
  
 0.481
AMG72545.1
Phage integrase family protein; Annotated by: sma3s; COG4974; Belongs to the 'phage' integrase family.
  
  
 0.446
AMG75855.1
Regulatory protein GntR HTH; Annotated by: sma3s; COG2186.
  
  
0.440
hutG
N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741.
 
  
 0.405
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.