Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG73019.1 | AMG73024.1 | SGRAN_0623 | SGRAN_0628 | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | UPF0721 transmembrane protein; Annotated by: sma3s; COG0730. | 0.445 |
AMG73019.1 | ahpC | SGRAN_0623 | SGRAN_0624 | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | Peroxiredoxin; Annotated by: sma3s; COG0450. | 0.793 |
AMG73019.1 | blh2 | SGRAN_0623 | SGRAN_0627 | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | Beta-lactamase hydrolase-like protein; Annotated by: sma3s; COG0491. | 0.423 |
AMG73019.1 | trxC | SGRAN_0623 | SGRAN_0625 | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | Thioredoxin 2; Annotated by: sma3s; COG3118. | 0.571 |
AMG73024.1 | AMG73019.1 | SGRAN_0628 | SGRAN_0623 | UPF0721 transmembrane protein; Annotated by: sma3s; COG0730. | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | 0.445 |
AMG73024.1 | blh2 | SGRAN_0628 | SGRAN_0627 | UPF0721 transmembrane protein; Annotated by: sma3s; COG0730. | Beta-lactamase hydrolase-like protein; Annotated by: sma3s; COG0491. | 0.856 |
ahpC | AMG73019.1 | SGRAN_0624 | SGRAN_0623 | Peroxiredoxin; Annotated by: sma3s; COG0450. | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | 0.793 |
ahpC | trxC | SGRAN_0624 | SGRAN_0625 | Peroxiredoxin; Annotated by: sma3s; COG0450. | Thioredoxin 2; Annotated by: sma3s; COG3118. | 0.798 |
blh2 | AMG73019.1 | SGRAN_0627 | SGRAN_0623 | Beta-lactamase hydrolase-like protein; Annotated by: sma3s; COG0491. | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | 0.423 |
blh2 | AMG73024.1 | SGRAN_0627 | SGRAN_0628 | Beta-lactamase hydrolase-like protein; Annotated by: sma3s; COG0491. | UPF0721 transmembrane protein; Annotated by: sma3s; COG0730. | 0.856 |
trxC | AMG73019.1 | SGRAN_0625 | SGRAN_0623 | Thioredoxin 2; Annotated by: sma3s; COG3118. | Biofilm growth-associated repressor; Annotated by: sma3s; COG0640. | 0.571 |
trxC | ahpC | SGRAN_0625 | SGRAN_0624 | Thioredoxin 2; Annotated by: sma3s; COG3118. | Peroxiredoxin; Annotated by: sma3s; COG0450. | 0.798 |