STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG73275.1Uncharacterized protein; Annotated by: sma3s. (148 aa)    
Predicted Functional Partners:
AMG73274.1
Protein transfer agent (GTA); Annotated by: sma3s.
 
 
   0.971
AMG73272.1
Phage protein; Annotated by: sma3s; COG5449.
 
 
   0.959
AMG73267.1
TP901-1 family phage major tail protein; Annotated by: sma3s; COG5437.
 
 
   0.957
AMG73271.1
Uncharacterized protein; Annotated by: sma3s; COG5448.
 
 
   0.955
AMG73260.1
Phage major capsid protein, HK97; Annotated by: sma3s; COG4653.
 
 
 
 0.852
AMG73273.1
Uncharacterized protein; Annotated by: sma3s.
  
  
 0.850
AMG73270.1
Tail tape measure protein; Annotated by: sma3s.
 
  
 0.843
gp34
Portal protein; Annotated by: sma3s; COG4695.
 
 
 0.837
AMG73259.1
Peptidase U35, phage prohead HK97; Annotated by: sma3s; COG3740.
 
   
 0.803
AMG73268.1
Uncharacterized protein; Annotated by: sma3s.
       0.771
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.