Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMG73462.1Putative nucleic-acid-binding protein containing a Zn-ribbon; Annotated by: sma3s; COG1545. (430 aa)    
Predicted Functional Partners:
ltp2
Lipid-transfer protein; Annotated by: sma3s; COG0183.
 
 
 0.975
AMG73982.1
Putative nonspecific lipid-transfer protein; Annotated by: sma3s; COG0183.
 
 
 0.894
AMG75609.1
Acetyl-CoA acetyltransferase-like protein; Annotated by: sma3s; COG0183.
 
 
 0.893
paaJ
Thiolase; Annotated by: sma3s; COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.873
atoB
Thiolase; Annotated by: sma3s; COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.872
AMG73472.1
Acyl dehydratase MaoC; Annotated by: sma3s; COG2030.
 
 
 0.866
AMG75284.1
Thiolase; Annotated by: sma3s; COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.863
AMG73471.1
Acyl dehydratase; Annotated by: sma3s; COG2030.
 
 
 0.842
tioL
Lipid-transfer protein; Annotated by: sma3s; COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.798
AMG73466.1
Acyl-CoA dehydrogenase, C-terminal domain protein; Annotated by: sma3s; COG1960.
 
    0.744
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
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