Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG73283.1 | pnbA | SGRAN_0889 | SGRAN_1085 | Glyoxalase/bleomycin resistance protein/dioxygenase; Annotated by: sma3s; COG0346. | Nitroreductase; Annotated by: sma3s; COG0778. | 0.482 |
AMG75408.1 | pnbA | SGRAN_3061 | SGRAN_1085 | Uncharacterized protein; Annotated by: sma3s. | Nitroreductase; Annotated by: sma3s; COG0778. | 0.484 |
AMG76044.1 | pnbA | SGRAN_3705 | SGRAN_1085 | Glyoxalase family protein; Annotated by: sma3s; COG0346. | Nitroreductase; Annotated by: sma3s; COG0778. | 0.444 |
gltB | pnbA | SGRAN_1551 | SGRAN_1085 | GLTS alpha chain; Annotated by: sma3s; COG0069; COG0067; COG0070. | Nitroreductase; Annotated by: sma3s; COG0778. | 0.453 |
gltB | rbbA | SGRAN_1551 | SGRAN_0657 | GLTS alpha chain; Annotated by: sma3s; COG0069; COG0067; COG0070. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | 0.477 |
mcr | pnbA | SGRAN_1084 | SGRAN_1085 | Carnitine dehydratase; Annotated by: sma3s; COG1804; Belongs to the CoA-transferase III family. | Nitroreductase; Annotated by: sma3s; COG0778. | 0.615 |
pnbA | AMG73283.1 | SGRAN_1085 | SGRAN_0889 | Nitroreductase; Annotated by: sma3s; COG0778. | Glyoxalase/bleomycin resistance protein/dioxygenase; Annotated by: sma3s; COG0346. | 0.482 |
pnbA | AMG75408.1 | SGRAN_1085 | SGRAN_3061 | Nitroreductase; Annotated by: sma3s; COG0778. | Uncharacterized protein; Annotated by: sma3s. | 0.484 |
pnbA | AMG76044.1 | SGRAN_1085 | SGRAN_3705 | Nitroreductase; Annotated by: sma3s; COG0778. | Glyoxalase family protein; Annotated by: sma3s; COG0346. | 0.444 |
pnbA | gltB | SGRAN_1085 | SGRAN_1551 | Nitroreductase; Annotated by: sma3s; COG0778. | GLTS alpha chain; Annotated by: sma3s; COG0069; COG0067; COG0070. | 0.453 |
pnbA | mcr | SGRAN_1085 | SGRAN_1084 | Nitroreductase; Annotated by: sma3s; COG0778. | Carnitine dehydratase; Annotated by: sma3s; COG1804; Belongs to the CoA-transferase III family. | 0.615 |
pnbA | rbbA | SGRAN_1085 | SGRAN_0657 | Nitroreductase; Annotated by: sma3s; COG0778. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | 0.509 |
pnbA | yadH | SGRAN_1085 | SGRAN_2250 | Nitroreductase; Annotated by: sma3s; COG0778. | Transport permease protein; Annotated by: sma3s; COG0842. | 0.429 |
pnbA | yadH2 | SGRAN_1085 | SGRAN_2587 | Nitroreductase; Annotated by: sma3s; COG0778. | Transport permease protein; Annotated by: sma3s; COG1682. | 0.429 |
pnbA | yhhJ | SGRAN_1085 | SGRAN_0658 | Nitroreductase; Annotated by: sma3s; COG0778. | ABC-2 type transporter; Annotated by: sma3s; COG0842. | 0.429 |
rbbA | gltB | SGRAN_0657 | SGRAN_1551 | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | GLTS alpha chain; Annotated by: sma3s; COG0069; COG0067; COG0070. | 0.477 |
rbbA | pnbA | SGRAN_0657 | SGRAN_1085 | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | Nitroreductase; Annotated by: sma3s; COG0778. | 0.509 |
rbbA | yadH | SGRAN_0657 | SGRAN_2250 | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | Transport permease protein; Annotated by: sma3s; COG0842. | 0.885 |
rbbA | yadH2 | SGRAN_0657 | SGRAN_2587 | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | Transport permease protein; Annotated by: sma3s; COG1682. | 0.885 |
rbbA | yhhJ | SGRAN_0657 | SGRAN_0658 | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | ABC-2 type transporter; Annotated by: sma3s; COG0842. | 0.984 |
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