STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG73770.14-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. (145 aa)    
Predicted Functional Partners:
AMG73771.1
Alpha/beta hydrolase; Annotated by: sma3s; COG1506.
     
 0.791
gloA
Glyoxalase; Annotated by: sma3s; COG0346.
       0.763
AMG73768.1
2-nitropropane dioxygenase; Annotated by: sma3s; COG2070.
   
   0.745
gloB
Hydroxyacylglutathione hydrolase GloB; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
    0.612
fcbC
Thioesterase; Annotated by: sma3s; COG0824.
  
   
 0.511
fabD
Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331.
  
 
 0.509
AMG72812.1
Putative acyl-carrier protein; Annotated by: sma3s; COG0331.
  
 
 0.507
AMG73772.1
Putative membrane protein; Annotated by: sma3s.
       0.503
AMG75618.1
Thioesterase superfamily protein; Annotated by: sma3s; COG0824.
  
   
 0.441
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.438
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.