Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
trbD | trbF2 | SGRAN_0065 | SGRAN_1516 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.785 |
trbD | trbJ4 | SGRAN_0065 | SGRAN_2529 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbJ; Annotated by: sma3s; COG5314. | 0.781 |
trbD | trbL | SGRAN_0065 | SGRAN_0069 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.947 |
trbD | trbL1 | SGRAN_0065 | SGRAN_0175 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.739 |
trbD | trbL3 | SGRAN_0065 | SGRAN_1846 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.747 |
trbD | trbL4 | SGRAN_0065 | SGRAN_2528 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.779 |
trbD | trbL5 | SGRAN_0065 | SGRAN_3176 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.777 |
trbD | trbL6 | SGRAN_0065 | SGRAN_4241 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.779 |
trbD3 | trbF2 | SGRAN_2531 | SGRAN_1516 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.786 |
trbD3 | trbJ4 | SGRAN_2531 | SGRAN_2529 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbJ; Annotated by: sma3s; COG5314. | 0.785 |
trbD3 | trbL | SGRAN_2531 | SGRAN_0069 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.769 |
trbD3 | trbL1 | SGRAN_2531 | SGRAN_0175 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.704 |
trbD3 | trbL3 | SGRAN_2531 | SGRAN_1846 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.715 |
trbD3 | trbL4 | SGRAN_2531 | SGRAN_2528 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.783 |
trbD3 | trbL5 | SGRAN_2531 | SGRAN_3176 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.771 |
trbD3 | trbL6 | SGRAN_2531 | SGRAN_4241 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.774 |
trbD4 | trbF2 | SGRAN_3180 | SGRAN_1516 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.785 |
trbD4 | trbJ4 | SGRAN_3180 | SGRAN_2529 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbJ; Annotated by: sma3s; COG5314. | 0.781 |
trbD4 | trbL | SGRAN_3180 | SGRAN_0069 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.776 |
trbD4 | trbL1 | SGRAN_3180 | SGRAN_0175 | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.744 |
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