Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG76059.1 | hlyB | SGRAN_3726 | SGRAN_1736 | CBS domain-containing putative signal-transduction protein; Annotated by: sma3s; COG0517. | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | 0.792 |
hlyB | AMG76059.1 | SGRAN_1736 | SGRAN_3726 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | CBS domain-containing putative signal-transduction protein; Annotated by: sma3s; COG0517. | 0.792 |
hlyB | hlyB2 | SGRAN_1736 | SGRAN_1737 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Hemolysin secretion protein HlyB; Annotated by: sma3s; COG2274. | 0.877 |
hlyB | ndvA | SGRAN_1736 | SGRAN_0884 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Annotated by: sma3s; COG1132. | 0.914 |
hlyB | pltI | SGRAN_1736 | SGRAN_0689 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Secretion protein HlyD family protein; Annotated by: sma3s; COG1566. | 0.559 |
hlyB | rbbA | SGRAN_1736 | SGRAN_0657 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | 0.639 |
hlyB | rmrA | SGRAN_1736 | SGRAN_1611 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Multidrug ABC transporter permease; Annotated by: sma3s; COG1566. | 0.559 |
hlyB | yadG | SGRAN_1736 | SGRAN_2588 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131. | 0.605 |
hlyB | yadG2 | SGRAN_1736 | SGRAN_4031 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131. | 0.605 |
hlyB | ydhJ | SGRAN_1736 | SGRAN_0486 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | HlyD family secretion protein; Annotated by: sma3s; COG1566; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.559 |
hlyB | yhiI | SGRAN_1736 | SGRAN_0656 | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | Glycoside hydrolase family 43; Annotated by: sma3s; COG1566. | 0.559 |
hlyB2 | hlyB | SGRAN_1737 | SGRAN_1736 | Hemolysin secretion protein HlyB; Annotated by: sma3s; COG2274. | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | 0.877 |
ndvA | hlyB | SGRAN_0884 | SGRAN_1736 | Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Annotated by: sma3s; COG1132. | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | 0.914 |
ndvA | rbbA | SGRAN_0884 | SGRAN_0657 | Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Annotated by: sma3s; COG1132. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | 0.905 |
ndvA | yadG | SGRAN_0884 | SGRAN_2588 | Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Annotated by: sma3s; COG1132. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131. | 0.724 |
ndvA | yadG2 | SGRAN_0884 | SGRAN_4031 | Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Annotated by: sma3s; COG1132. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131. | 0.737 |
pltI | hlyB | SGRAN_0689 | SGRAN_1736 | Secretion protein HlyD family protein; Annotated by: sma3s; COG1566. | Type I secretion system ATPase; Annotated by: sma3s; COG2274. | 0.559 |
pltI | rbbA | SGRAN_0689 | SGRAN_0657 | Secretion protein HlyD family protein; Annotated by: sma3s; COG1566. | Multidrug ABC transporter ATP-binding protein; Annotated by: sma3s; COG1131; COG1121; COG0842. | 0.529 |
pltI | rmrA | SGRAN_0689 | SGRAN_1611 | Secretion protein HlyD family protein; Annotated by: sma3s; COG1566. | Multidrug ABC transporter permease; Annotated by: sma3s; COG1566. | 0.430 |
pltI | ydhJ | SGRAN_0689 | SGRAN_0486 | Secretion protein HlyD family protein; Annotated by: sma3s; COG1566. | HlyD family secretion protein; Annotated by: sma3s; COG1566; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.405 |
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