Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG72812.1 | AMG73770.1 | SGRAN_0416 | SGRAN_1381 | Putative acyl-carrier protein; Annotated by: sma3s; COG0331. | 4-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. | 0.507 |
AMG72812.1 | fabD | SGRAN_0416 | SGRAN_1459 | Putative acyl-carrier protein; Annotated by: sma3s; COG0331. | Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331. | 0.900 |
AMG72812.1 | fcbC | SGRAN_0416 | SGRAN_1743 | Putative acyl-carrier protein; Annotated by: sma3s; COG0331. | Thioesterase; Annotated by: sma3s; COG0824. | 0.507 |
AMG73770.1 | AMG72812.1 | SGRAN_1381 | SGRAN_0416 | 4-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. | Putative acyl-carrier protein; Annotated by: sma3s; COG0331. | 0.507 |
AMG73770.1 | fabD | SGRAN_1381 | SGRAN_1459 | 4-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. | Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331. | 0.509 |
AMG73770.1 | fcbC | SGRAN_1381 | SGRAN_1743 | 4-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. | Thioesterase; Annotated by: sma3s; COG0824. | 0.511 |
AMG74123.1 | AMG74124.1 | SGRAN_1744 | SGRAN_1745 | Alpha/beta hydrolase; Annotated by: sma3s; COG0596. | TonB-dependent receptor; Annotated by: manual blastp; COG1629. | 0.444 |
AMG74123.1 | fcbC | SGRAN_1744 | SGRAN_1743 | Alpha/beta hydrolase; Annotated by: sma3s; COG0596. | Thioesterase; Annotated by: sma3s; COG0824. | 0.782 |
AMG74124.1 | AMG74123.1 | SGRAN_1745 | SGRAN_1744 | TonB-dependent receptor; Annotated by: manual blastp; COG1629. | Alpha/beta hydrolase; Annotated by: sma3s; COG0596. | 0.444 |
AMG74124.1 | fcbC | SGRAN_1745 | SGRAN_1743 | TonB-dependent receptor; Annotated by: manual blastp; COG1629. | Thioesterase; Annotated by: sma3s; COG0824. | 0.444 |
fabD | AMG72812.1 | SGRAN_1459 | SGRAN_0416 | Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331. | Putative acyl-carrier protein; Annotated by: sma3s; COG0331. | 0.900 |
fabD | AMG73770.1 | SGRAN_1459 | SGRAN_1381 | Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331. | 4-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. | 0.509 |
fabD | fcbC | SGRAN_1459 | SGRAN_1743 | Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331. | Thioesterase; Annotated by: sma3s; COG0824. | 0.507 |
fcbC | AMG72812.1 | SGRAN_1743 | SGRAN_0416 | Thioesterase; Annotated by: sma3s; COG0824. | Putative acyl-carrier protein; Annotated by: sma3s; COG0331. | 0.507 |
fcbC | AMG73770.1 | SGRAN_1743 | SGRAN_1381 | Thioesterase; Annotated by: sma3s; COG0824. | 4-hydroxybenzoyl-CoA thioesterase; Annotated by: sma3s; COG0824. | 0.511 |
fcbC | AMG74123.1 | SGRAN_1743 | SGRAN_1744 | Thioesterase; Annotated by: sma3s; COG0824. | Alpha/beta hydrolase; Annotated by: sma3s; COG0596. | 0.782 |
fcbC | AMG74124.1 | SGRAN_1743 | SGRAN_1745 | Thioesterase; Annotated by: sma3s; COG0824. | TonB-dependent receptor; Annotated by: manual blastp; COG1629. | 0.444 |
fcbC | fabD | SGRAN_1743 | SGRAN_1459 | Thioesterase; Annotated by: sma3s; COG0824. | Malonyl CoA-acyl carrier protein transacylase; Annotated by: sma3s; COG0331. | 0.507 |