Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG74398.1 | AMG74400.1 | SGRAN_2021 | SGRAN_2023 | Transporter of the DMT superfamily; Annotated by: sma3s. | Branched-chain amino acid aminotransferase; Annotated by: sma3s. | 0.551 |
AMG74398.1 | ilvE2 | SGRAN_2021 | SGRAN_2022 | Transporter of the DMT superfamily; Annotated by: sma3s. | Aminotransferase class IV; Annotated by: sma3s; COG0115. | 0.562 |
AMG74398.1 | xaa | SGRAN_2021 | SGRAN_2024 | Transporter of the DMT superfamily; Annotated by: sma3s. | Amidohydrolase; Annotated by: sma3s; COG1228. | 0.418 |
AMG74400.1 | AMG74398.1 | SGRAN_2023 | SGRAN_2021 | Branched-chain amino acid aminotransferase; Annotated by: sma3s. | Transporter of the DMT superfamily; Annotated by: sma3s. | 0.551 |
AMG74400.1 | ilvE2 | SGRAN_2023 | SGRAN_2022 | Branched-chain amino acid aminotransferase; Annotated by: sma3s. | Aminotransferase class IV; Annotated by: sma3s; COG0115. | 0.995 |
AMG74400.1 | xaa | SGRAN_2023 | SGRAN_2024 | Branched-chain amino acid aminotransferase; Annotated by: sma3s. | Amidohydrolase; Annotated by: sma3s; COG1228. | 0.570 |
AMG74512.1 | AMG75936.1 | SGRAN_2139 | SGRAN_3595 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | 0.401 |
AMG74512.1 | hutH | SGRAN_2139 | SGRAN_3306 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Histidine ammonia-lyase; Annotated by: sma3s; COG2986. | 0.509 |
AMG74512.1 | hutU | SGRAN_2139 | SGRAN_3304 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.525 |
AMG74512.1 | xaa | SGRAN_2139 | SGRAN_2024 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Amidohydrolase; Annotated by: sma3s; COG1228. | 0.401 |
AMG75936.1 | AMG74512.1 | SGRAN_3595 | SGRAN_2139 | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | 0.401 |
AMG75936.1 | hutG | SGRAN_3595 | SGRAN_3305 | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | 0.401 |
AMG75936.1 | hutH | SGRAN_3595 | SGRAN_3306 | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | Histidine ammonia-lyase; Annotated by: sma3s; COG2986. | 0.482 |
AMG75936.1 | hutU | SGRAN_3595 | SGRAN_3304 | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.484 |
AMG75936.1 | xaa | SGRAN_3595 | SGRAN_2024 | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | Amidohydrolase; Annotated by: sma3s; COG1228. | 0.540 |
hutG | AMG75936.1 | SGRAN_3305 | SGRAN_3595 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Amidohydrolase family enzyme; Annotated by: sma3s; COG1228; COG0044. | 0.401 |
hutG | hutH | SGRAN_3305 | SGRAN_3306 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Histidine ammonia-lyase; Annotated by: sma3s; COG2986. | 0.955 |
hutG | hutU | SGRAN_3305 | SGRAN_3304 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.955 |
hutG | xaa | SGRAN_3305 | SGRAN_2024 | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | Amidohydrolase; Annotated by: sma3s; COG1228. | 0.401 |
hutH | AMG74512.1 | SGRAN_3306 | SGRAN_2139 | Histidine ammonia-lyase; Annotated by: sma3s; COG2986. | N-formylglutamate amidohydrolase; Annotated by: sma3s; COG3741. | 0.509 |
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