Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG73418.1 | AMG74470.1 | SGRAN_1024 | SGRAN_2095 | Uncharacterized protein; Annotated by: sma3s. | Acylhydrolase; Annotated by: manual blastp; COG2755. | 0.841 |
AMG73771.1 | AMG74470.1 | SGRAN_1382 | SGRAN_2095 | Alpha/beta hydrolase; Annotated by: sma3s; COG1506. | Acylhydrolase; Annotated by: manual blastp; COG2755. | 0.555 |
AMG73792.1 | AMG74470.1 | SGRAN_1403 | SGRAN_2095 | Uncharacterized protein; Annotated by: sma3s. | Acylhydrolase; Annotated by: manual blastp; COG2755. | 0.506 |
AMG74063.1 | AMG74470.1 | SGRAN_1683 | SGRAN_2095 | Short-chain dehydrogenase/reductase SDR; Annotated by: sma3s; COG0300; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Acylhydrolase; Annotated by: manual blastp; COG2755. | 0.490 |
AMG74469.1 | AMG74470.1 | SGRAN_2094 | SGRAN_2095 | Aspartate racemase; Annotated by: sma3s; COG1794. | Acylhydrolase; Annotated by: manual blastp; COG2755. | 0.462 |
AMG74469.1 | AMG74471.1 | SGRAN_2094 | SGRAN_2096 | Aspartate racemase; Annotated by: sma3s; COG1794. | Acyltransferase; Annotated by: manual blastp; COG1835. | 0.450 |
AMG74470.1 | AMG73418.1 | SGRAN_2095 | SGRAN_1024 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Uncharacterized protein; Annotated by: sma3s. | 0.841 |
AMG74470.1 | AMG73771.1 | SGRAN_2095 | SGRAN_1382 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Alpha/beta hydrolase; Annotated by: sma3s; COG1506. | 0.555 |
AMG74470.1 | AMG73792.1 | SGRAN_2095 | SGRAN_1403 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Uncharacterized protein; Annotated by: sma3s. | 0.506 |
AMG74470.1 | AMG74063.1 | SGRAN_2095 | SGRAN_1683 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Short-chain dehydrogenase/reductase SDR; Annotated by: sma3s; COG0300; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.490 |
AMG74470.1 | AMG74469.1 | SGRAN_2095 | SGRAN_2094 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Aspartate racemase; Annotated by: sma3s; COG1794. | 0.462 |
AMG74470.1 | AMG74471.1 | SGRAN_2095 | SGRAN_2096 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Acyltransferase; Annotated by: manual blastp; COG1835. | 0.792 |
AMG74470.1 | AMG74472.1 | SGRAN_2095 | SGRAN_2097 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Parallel beta-helix repeat-containing protein; Annotated by: sma3s; COG3420. | 0.621 |
AMG74470.1 | AMG74473.1 | SGRAN_2095 | SGRAN_2098 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Uncharacterized protein; Annotated by: sma3s. | 0.570 |
AMG74470.1 | AMG75026.1 | SGRAN_2095 | SGRAN_2676 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Short-chain dehydrogenase/reductase SDR; Annotated by: sma3s; COG4221; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.492 |
AMG74470.1 | AMG75676.1 | SGRAN_2095 | SGRAN_3333 | Acylhydrolase; Annotated by: manual blastp; COG2755. | Ubiquinol-cytochrome C reductase; Annotated by: sma3s; COG2947. | 0.479 |
AMG74471.1 | AMG74469.1 | SGRAN_2096 | SGRAN_2094 | Acyltransferase; Annotated by: manual blastp; COG1835. | Aspartate racemase; Annotated by: sma3s; COG1794. | 0.450 |
AMG74471.1 | AMG74470.1 | SGRAN_2096 | SGRAN_2095 | Acyltransferase; Annotated by: manual blastp; COG1835. | Acylhydrolase; Annotated by: manual blastp; COG2755. | 0.792 |
AMG74471.1 | AMG74472.1 | SGRAN_2096 | SGRAN_2097 | Acyltransferase; Annotated by: manual blastp; COG1835. | Parallel beta-helix repeat-containing protein; Annotated by: sma3s; COG3420. | 0.570 |
AMG74471.1 | AMG74473.1 | SGRAN_2096 | SGRAN_2098 | Acyltransferase; Annotated by: manual blastp; COG1835. | Uncharacterized protein; Annotated by: sma3s. | 0.570 |
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