Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
trbC | trbD | SGRAN_0064 | SGRAN_0065 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | 0.950 |
trbC | trbD3 | SGRAN_0064 | SGRAN_2531 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | 0.788 |
trbC | trbF2 | SGRAN_0064 | SGRAN_1516 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.782 |
trbC | trbF4 | SGRAN_0064 | SGRAN_2527 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.773 |
trbC | trbG3 | SGRAN_0064 | SGRAN_2526 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | P-type conjugative transfer protein TrbG; Annotated by: sma3s; COG3504. | 0.622 |
trbC | trbJ4 | SGRAN_0064 | SGRAN_2529 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbJ; Annotated by: sma3s; COG5314. | 0.781 |
trbC | trbL4 | SGRAN_0064 | SGRAN_2528 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.781 |
trbC4 | trbD | SGRAN_2532 | SGRAN_0065 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | 0.788 |
trbC4 | trbD3 | SGRAN_2532 | SGRAN_2531 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | 0.950 |
trbC4 | trbF2 | SGRAN_2532 | SGRAN_1516 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.782 |
trbC4 | trbF4 | SGRAN_2532 | SGRAN_2527 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.776 |
trbC4 | trbG3 | SGRAN_2532 | SGRAN_2526 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | P-type conjugative transfer protein TrbG; Annotated by: sma3s; COG3504. | 0.661 |
trbC4 | trbJ4 | SGRAN_2532 | SGRAN_2529 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbJ; Annotated by: sma3s; COG5314. | 0.783 |
trbC4 | trbL4 | SGRAN_2532 | SGRAN_2528 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbL; Annotated by: sma3s; COG3846. | 0.782 |
trbC6 | trbD | SGRAN_3181 | SGRAN_0065 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | 0.788 |
trbC6 | trbD3 | SGRAN_3181 | SGRAN_2531 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbD; Annotated by: sma3s; COG5268. | 0.788 |
trbC6 | trbF2 | SGRAN_3181 | SGRAN_1516 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.782 |
trbC6 | trbF4 | SGRAN_3181 | SGRAN_2527 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbF; Annotated by: sma3s; COG3701. | 0.776 |
trbC6 | trbG3 | SGRAN_3181 | SGRAN_2526 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | P-type conjugative transfer protein TrbG; Annotated by: sma3s; COG3504. | 0.657 |
trbC6 | trbJ4 | SGRAN_3181 | SGRAN_2529 | Conjugal transfer protein TrbC; Annotated by: sma3s; COG3838. | Conjugal transfer protein TrbJ; Annotated by: sma3s; COG5314. | 0.782 |
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