STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaG3Enoyl-CoA hydratase; Annotated by: sma3s; COG1024. (267 aa)    
Predicted Functional Partners:
AMG72864.1
Enoyl-CoA hydratase; Annotated by: sma3s; COG1024.
 
 
0.823
crt
Crotonase; Annotated by: sma3s; COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.822
AMG73459.1
enoyl-CoA hydratase; Annotated by: manual blastp; COG1024.
 
 
0.821
crt3
Crotonase; Annotated by: sma3s; COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.817
echA19
Enoyl-CoA hydratase; Annotated by: sma3s; COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.815
echA4
Enoyl-CoA hydratase; Annotated by: sma3s; COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.812
echA5
Enoyl-CoA hydratase; Annotated by: sma3s; COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.811
echA9
3-hydroxyisobutyryl-CoA hydrolase; Annotated by: sma3s; COG1024.
 
 
0.795
AMG73402.1
Periplasmic sensor hybrid histidine kinase; Annotated by: sma3s; COG4191; COG2204.
  
 
 0.786
hbd
3-hydroxybutyryl-CoA dehydrogenase; Annotated by: sma3s; COG1250.
 0.760
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
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