Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG75498.1 | AMG75500.1 | SGRAN_3154 | SGRAN_3156 | ATPase; Annotated by: sma3s; COG0714. | Von Willebrand factor A; Annotated by: sma3s; COG3825. | 0.894 |
AMG75498.1 | acd2 | SGRAN_3154 | SGRAN_2322 | ATPase; Annotated by: sma3s; COG0714. | Acyl-CoA dehydrogenase; Annotated by: sma3s; COG1960. | 0.449 |
AMG75499.1 | AMG75500.1 | SGRAN_3155 | SGRAN_3156 | Methyl-accepting chemotaxis sensory transducer; Annotated by: sma3s; COG0840. | Von Willebrand factor A; Annotated by: sma3s; COG3825. | 0.430 |
AMG75500.1 | AMG75498.1 | SGRAN_3156 | SGRAN_3154 | Von Willebrand factor A; Annotated by: sma3s; COG3825. | ATPase; Annotated by: sma3s; COG0714. | 0.894 |
AMG75500.1 | AMG75499.1 | SGRAN_3156 | SGRAN_3155 | Von Willebrand factor A; Annotated by: sma3s; COG3825. | Methyl-accepting chemotaxis sensory transducer; Annotated by: sma3s; COG0840. | 0.430 |
AMG75500.1 | AMG75502.1 | SGRAN_3156 | SGRAN_3158 | Von Willebrand factor A; Annotated by: sma3s; COG3825. | Membrane protein; Annotated by: sma3s; COG3739. | 0.496 |
AMG75500.1 | acd2 | SGRAN_3156 | SGRAN_2322 | Von Willebrand factor A; Annotated by: sma3s; COG3825. | Acyl-CoA dehydrogenase; Annotated by: sma3s; COG1960. | 0.439 |
AMG75500.1 | amj | SGRAN_3156 | SGRAN_3157 | Von Willebrand factor A; Annotated by: sma3s; COG3825. | Uncharacterized protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.477 |
AMG75500.1 | ispDF | SGRAN_3156 | SGRAN_2204 | Von Willebrand factor A; Annotated by: sma3s; COG3825. | Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.455 |
AMG75502.1 | AMG75500.1 | SGRAN_3158 | SGRAN_3156 | Membrane protein; Annotated by: sma3s; COG3739. | Von Willebrand factor A; Annotated by: sma3s; COG3825. | 0.496 |
AMG75502.1 | amj | SGRAN_3158 | SGRAN_3157 | Membrane protein; Annotated by: sma3s; COG3739. | Uncharacterized protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.781 |
acd2 | AMG75498.1 | SGRAN_2322 | SGRAN_3154 | Acyl-CoA dehydrogenase; Annotated by: sma3s; COG1960. | ATPase; Annotated by: sma3s; COG0714. | 0.449 |
acd2 | AMG75500.1 | SGRAN_2322 | SGRAN_3156 | Acyl-CoA dehydrogenase; Annotated by: sma3s; COG1960. | Von Willebrand factor A; Annotated by: sma3s; COG3825. | 0.439 |
amj | AMG75500.1 | SGRAN_3157 | SGRAN_3156 | Uncharacterized protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Von Willebrand factor A; Annotated by: sma3s; COG3825. | 0.477 |
amj | AMG75502.1 | SGRAN_3157 | SGRAN_3158 | Uncharacterized protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Membrane protein; Annotated by: sma3s; COG3739. | 0.781 |
ispDF | AMG75500.1 | SGRAN_2204 | SGRAN_3156 | Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | Von Willebrand factor A; Annotated by: sma3s; COG3825. | 0.455 |