Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG75621.1 | AMG75622.1 | SGRAN_3278 | SGRAN_3279 | Transcriptional regulator, TetR family; Annotated by: sma3s; COG1309. | Rieske (2Fe-2S) iron-sulfur domain protein; Annotated by: sma3s; COG4638. | 0.464 |
AMG75621.1 | AMG75623.1 | SGRAN_3278 | SGRAN_3280 | Transcriptional regulator, TetR family; Annotated by: sma3s; COG1309. | Oxidoreductase; Annotated by: sma3s; COG0673. | 0.415 |
AMG75621.1 | AMG75624.1 | SGRAN_3278 | SGRAN_3281 | Transcriptional regulator, TetR family; Annotated by: sma3s; COG1309. | Aromatic-ring-hydroxylating dioxygenase beta subunit; Annotated by: sma3s. | 0.401 |
AMG75622.1 | AMG75621.1 | SGRAN_3279 | SGRAN_3278 | Rieske (2Fe-2S) iron-sulfur domain protein; Annotated by: sma3s; COG4638. | Transcriptional regulator, TetR family; Annotated by: sma3s; COG1309. | 0.464 |
AMG75622.1 | AMG75623.1 | SGRAN_3279 | SGRAN_3280 | Rieske (2Fe-2S) iron-sulfur domain protein; Annotated by: sma3s; COG4638. | Oxidoreductase; Annotated by: sma3s; COG0673. | 0.714 |
AMG75622.1 | AMG75624.1 | SGRAN_3279 | SGRAN_3281 | Rieske (2Fe-2S) iron-sulfur domain protein; Annotated by: sma3s; COG4638. | Aromatic-ring-hydroxylating dioxygenase beta subunit; Annotated by: sma3s. | 0.681 |
AMG75623.1 | AMG75621.1 | SGRAN_3280 | SGRAN_3278 | Oxidoreductase; Annotated by: sma3s; COG0673. | Transcriptional regulator, TetR family; Annotated by: sma3s; COG1309. | 0.415 |
AMG75623.1 | AMG75622.1 | SGRAN_3280 | SGRAN_3279 | Oxidoreductase; Annotated by: sma3s; COG0673. | Rieske (2Fe-2S) iron-sulfur domain protein; Annotated by: sma3s; COG4638. | 0.714 |
AMG75623.1 | AMG75624.1 | SGRAN_3280 | SGRAN_3281 | Oxidoreductase; Annotated by: sma3s; COG0673. | Aromatic-ring-hydroxylating dioxygenase beta subunit; Annotated by: sma3s. | 0.741 |
AMG75624.1 | AMG75621.1 | SGRAN_3281 | SGRAN_3278 | Aromatic-ring-hydroxylating dioxygenase beta subunit; Annotated by: sma3s. | Transcriptional regulator, TetR family; Annotated by: sma3s; COG1309. | 0.401 |
AMG75624.1 | AMG75622.1 | SGRAN_3281 | SGRAN_3279 | Aromatic-ring-hydroxylating dioxygenase beta subunit; Annotated by: sma3s. | Rieske (2Fe-2S) iron-sulfur domain protein; Annotated by: sma3s; COG4638. | 0.681 |
AMG75624.1 | AMG75623.1 | SGRAN_3281 | SGRAN_3280 | Aromatic-ring-hydroxylating dioxygenase beta subunit; Annotated by: sma3s. | Oxidoreductase; Annotated by: sma3s; COG0673. | 0.741 |