Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG72485.1 | AMG75638.1 | SGRAN_0087 | SGRAN_3295 | Uncharacterized protein; Annotated by: sma3s. | Major facilitator superfamily; Annotated by: sma3s; COG2814. | 0.474 |
AMG75172.1 | AMG75638.1 | SGRAN_2823 | SGRAN_3295 | Membrane protein; Annotated by: sma3s. | Major facilitator superfamily; Annotated by: sma3s; COG2814. | 0.475 |
AMG75638.1 | AMG72485.1 | SGRAN_3295 | SGRAN_0087 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Uncharacterized protein; Annotated by: sma3s. | 0.474 |
AMG75638.1 | AMG75172.1 | SGRAN_3295 | SGRAN_2823 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Membrane protein; Annotated by: sma3s. | 0.475 |
AMG75638.1 | AMG75639.1 | SGRAN_3295 | SGRAN_3296 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Uncharacterized protein; Annotated by: sma3s. | 0.951 |
AMG75638.1 | AMG75640.1 | SGRAN_3295 | SGRAN_3297 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Sulfotransferase; Annotated by: sma3s; COG4783. | 0.914 |
AMG75638.1 | AMG75641.1 | SGRAN_3295 | SGRAN_3298 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | TonB-dependent receptor; Annotated by: sma3s; COG1629. | 0.946 |
AMG75638.1 | AMG75644.1 | SGRAN_3295 | SGRAN_3301 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Uncharacterized protein; Annotated by: sma3s; COG3403. | 0.475 |
AMG75638.1 | amiE | SGRAN_3295 | SGRAN_3299 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Hydrolase; Annotated by: sma3s; COG0388. | 0.913 |
AMG75638.1 | gabD | SGRAN_3295 | SGRAN_3293 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | Succinate-semialdehyde dehydrogenase NADP(+); Annotated by: sma3s; COG1012; Belongs to the aldehyde dehydrogenase family. | 0.714 |
AMG75638.1 | gabT | SGRAN_3295 | SGRAN_3294 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | GABA aminotransferase; Annotated by: sma3s; COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.792 |
AMG75638.1 | tauR | SGRAN_3295 | SGRAN_3300 | Major facilitator superfamily; Annotated by: sma3s; COG2814. | 2-aminoadipate aminotransferase; Annotated by: sma3s; COG1167. | 0.822 |
AMG75639.1 | AMG75638.1 | SGRAN_3296 | SGRAN_3295 | Uncharacterized protein; Annotated by: sma3s. | Major facilitator superfamily; Annotated by: sma3s; COG2814. | 0.951 |
AMG75639.1 | AMG75640.1 | SGRAN_3296 | SGRAN_3297 | Uncharacterized protein; Annotated by: sma3s. | Sulfotransferase; Annotated by: sma3s; COG4783. | 0.909 |
AMG75639.1 | AMG75641.1 | SGRAN_3296 | SGRAN_3298 | Uncharacterized protein; Annotated by: sma3s. | TonB-dependent receptor; Annotated by: sma3s; COG1629. | 0.946 |
AMG75639.1 | AMG75644.1 | SGRAN_3296 | SGRAN_3301 | Uncharacterized protein; Annotated by: sma3s. | Uncharacterized protein; Annotated by: sma3s; COG3403. | 0.475 |
AMG75639.1 | amiE | SGRAN_3296 | SGRAN_3299 | Uncharacterized protein; Annotated by: sma3s. | Hydrolase; Annotated by: sma3s; COG0388. | 0.906 |
AMG75639.1 | gabD | SGRAN_3296 | SGRAN_3293 | Uncharacterized protein; Annotated by: sma3s. | Succinate-semialdehyde dehydrogenase NADP(+); Annotated by: sma3s; COG1012; Belongs to the aldehyde dehydrogenase family. | 0.712 |
AMG75639.1 | gabT | SGRAN_3296 | SGRAN_3294 | Uncharacterized protein; Annotated by: sma3s. | GABA aminotransferase; Annotated by: sma3s; COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.779 |
AMG75639.1 | tauR | SGRAN_3296 | SGRAN_3300 | Uncharacterized protein; Annotated by: sma3s. | 2-aminoadipate aminotransferase; Annotated by: sma3s; COG1167. | 0.813 |
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