Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMG73187.1 | AMG75817.1 | SGRAN_0792 | SGRAN_3474 | Uncharacterized protein; Annotated by: sma3s; COG5649. | ATPase; Annotated by: sma3s; COG3832. | 0.421 |
AMG74600.1 | AMG75817.1 | SGRAN_2233 | SGRAN_3474 | Transmembrane protein; Annotated by: sma3s; COG4655. | ATPase; Annotated by: sma3s; COG3832. | 0.543 |
AMG75817.1 | AMG73187.1 | SGRAN_3474 | SGRAN_0792 | ATPase; Annotated by: sma3s; COG3832. | Uncharacterized protein; Annotated by: sma3s; COG5649. | 0.421 |
AMG75817.1 | AMG74600.1 | SGRAN_3474 | SGRAN_2233 | ATPase; Annotated by: sma3s; COG3832. | Transmembrane protein; Annotated by: sma3s; COG4655. | 0.543 |
AMG75817.1 | arsR6 | SGRAN_3474 | SGRAN_3475 | ATPase; Annotated by: sma3s; COG3832. | ArsR family transcriptional regulator; Annotated by: sma3s; COG0640. | 0.903 |
arsR6 | AMG75817.1 | SGRAN_3475 | SGRAN_3474 | ArsR family transcriptional regulator; Annotated by: sma3s; COG0640. | ATPase; Annotated by: sma3s; COG3832. | 0.903 |