STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motAFlagellar motor protein MotA; Annotated by: sma3s; COG1291. (287 aa)    
Predicted Functional Partners:
motB
Flagellar motor protein MotB; Annotated by: sma3s; COG1360.
 
 0.999
flgH
Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.991
AMG76438.1
Flagellar hook-associated protein; Annotated by: sma3s; COG1256; Belongs to the flagella basal body rod proteins family.
 
  
 0.987
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.982
flgG
Distal rod protein; Annotated by: sma3s; COG4786; Belongs to the flagella basal body rod proteins family.
 
  
 0.979
flgC
Flagellar basal-body rod protein FlgC; Annotated by: sma3s; COG1558; Belongs to the flagella basal body rod proteins family.
 
  
 0.979
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.977
cheA
Histidine kinase; Annotated by: sma3s; COG0643.
  
  
 0.964
flgI
Basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.963
AMG76433.1
Flagellar protein FliS; Annotated by: sma3s; COG1516.
 
  
 0.961
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
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