STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG76531.1Outer membrane efflux protein; Annotated by: sma3s; COG1538. (421 aa)    
Predicted Functional Partners:
hylD2
Secretion protein HlyD; Annotated by: sma3s; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.966
czcA5
Cation transporter; Annotated by: sma3s; COG3696; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.950
hylD
Annotated by: sma3s; COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.853
czcA3
Cation transporter; Annotated by: sma3s; COG3696; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.797
czcB1
Cation transporter; Annotated by: sma3s; COG0845.
 
 0.785
czcA2
Cation transporter; Annotated by: sma3s; COG3696; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.780
czcA4
Cation transporter; Annotated by: sma3s; COG3696; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.780
czcA
Cation transporter; Annotated by: sma3s; COG3696; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.775
cusB3
Cation efflux system protein CusBr; Annotated by: sma3s; COG0845; COG5569; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.738
czcB4
Metal transporter; Annotated by: sma3s; COG1566; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.737
Your Current Organism:
Sphingopyxis granuli
NCBI taxonomy Id: 267128
Other names: KCTC 12209, NBRC 100800, S. granuli, Sphingopyxis granuli Kim et al. 2011, Sphingopyxis sp. TFA, strain Kw07
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