STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0047Conserved hypothetical protein. (369 aa)    
Predicted Functional Partners:
MMP1648
Conserved hypothetical protein.
 
  
 0.728
MMP0048
Conserved hypothetical protein.
       0.573
cmd
Carboxymuconolactone decarboxylase:Alkylhydroperoxidase AhpD core domain.
 
  
 0.528
MMP0589
Conserved hypothetical protein.
 
    0.518
MMP0049
Carbonic anhydrase (gamma family Zn(II)-dependent enzymes).
       0.490
MMP0493
Probable metal chelatase.
 
  
 0.479
MMP0685
SAM (and some other nucleotide) binding motif:N-6 Adenine-specific DNA methylase.
 
    0.470
MMP0941
Phosphoadenosine phosphosulfate sulfotransferase; putative.
 
    0.461
bioF
8-amino-7-oxononanoate synthase.
  
  
 0.450
MMP1393
Conserved hypothetical protein.
   
    0.441
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.