STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtB-2Ammonia transporter. (411 aa)    
Predicted Functional Partners:
glnK1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.999
glnK2
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.999
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.998
NifI1
Nitrogen regulatory protein NifI1; Could be involved in the regulation of nitrogen fixation.
 
 
 0.982
nifI2
Nitrogen regulatory protein NifI2; Could be involved in the regulation of nitrogen fixation.
 
 
 0.982
glnA
Glutamine synthetase; Probably involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.
  
  
 0.842
gltB
Glutamate synthase; Citation: Nesbo CL, L'Haridon S, Stetter KO, Doolittle WF. (2001) Mol Biol Evol 18:362-75; Belongs to the glutamate synthase family.
 
   
 0.791
modA
Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Citation: Self WT, et al. Res Microbiol 2001;152(3-4):311-21 Reck S, et al. JBC 1996;271(5): 2557-62.
  
  
 0.718
MscMJ
Mechanosensitive (MS) ion channel; Citation: Kloda A, Martinac B Biophys J 2001; 80: 229-240.
     
 0.702
modA-3
Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Citation: Self WT, et al. Res Mcirobial 2001;152(3-4): 311-21 Reck S, et al. JBC 1996;271(5): 2557-62.
  
  
 0.697
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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