Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMP0072 | MMP0074 | MMP0072 | MMP0074 | Conserved archaeal protein. | Conserved hypothetical Archael protein. | 0.424 |
MMP0072 | argG | MMP0072 | MMP0073 | Conserved archaeal protein. | Argininosuccinate synthase; Citation: Hennigan AN, Reeve JN. (1994). Mol Microbiol 11:655-70; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.546 |
MMP0074 | MMP0072 | MMP0074 | MMP0072 | Conserved hypothetical Archael protein. | Conserved archaeal protein. | 0.424 |
MMP0074 | MMP0838 | MMP0074 | MMP0838 | Conserved hypothetical Archael protein. | Protein of unknown function DUF45. | 0.444 |
MMP0074 | argG | MMP0074 | MMP0073 | Conserved hypothetical Archael protein. | Argininosuccinate synthase; Citation: Hennigan AN, Reeve JN. (1994). Mol Microbiol 11:655-70; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.604 |
MMP0838 | MMP0074 | MMP0838 | MMP0074 | Protein of unknown function DUF45. | Conserved hypothetical Archael protein. | 0.444 |
argG | MMP0072 | MMP0073 | MMP0072 | Argininosuccinate synthase; Citation: Hennigan AN, Reeve JN. (1994). Mol Microbiol 11:655-70; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Conserved archaeal protein. | 0.546 |
argG | MMP0074 | MMP0073 | MMP0074 | Argininosuccinate synthase; Citation: Hennigan AN, Reeve JN. (1994). Mol Microbiol 11:655-70; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Conserved hypothetical Archael protein. | 0.604 |