STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0106Conserved hypothetical protein. (186 aa)    
Predicted Functional Partners:
MMP0107
Hypothetical protein.
  
    0.823
MMP0105
Conserved hypothetical protein.
 
   
0.584
MMP0108
ABC-type Iron(III)-binding periplasmic protein precursor.
  
    0.516
MMP0549
Conserved hypothetical protein.
  
     0.490
MMP0110
ABC transporter:AAA ATPase; Citation: Galagan, J.E. et al. Genome Res.12:532-542,2002.
  
    0.457
afuB_1
ABC-type transporter permease protein.
  
    0.444
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.