Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0107Hypothetical protein. (174 aa)    
Predicted Functional Partners:
cbiO
Cobalt transport protein O; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.900
atwA
Methyl coenzyme M reductase, component A2; Citation: J. Bact. 1993 175: 3196-3203.
  
 
 0.835
MMP1630
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
  
 
 0.835
MMP0106
Conserved hypothetical protein.
  
    0.822
MMP0108
ABC-type Iron(III)-binding periplasmic protein precursor.
  
  
 0.644
cbiN
Conserved hypothetical protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
  
 0.639
MMP0888
Putative cobalt transport protein.
  
  
 0.637
MMP0110
ABC transporter:AAA ATPase; Citation: Galagan, J.E. et al. Genome Res.12:532-542,2002.
  
    0.630
MMP0889
Cobalamin (vitamin B12) biosynthesis CbiM protein.
  
  
 0.628
cbiM
Cobalamin biosynthesis protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
  
 0.628
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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