Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
afuB_1ABC-type transporter permease protein. (538 aa)    
Predicted Functional Partners:
MMP0108
ABC-type Iron(III)-binding periplasmic protein precursor.
 
 
 0.998
MMP0110
ABC transporter:AAA ATPase; Citation: Galagan, J.E. et al. Genome Res.12:532-542,2002.
 
 
 0.989
modC
Molybdenum transport ATP-binding protein modC; Citation: Maupin-Furlow JA, et al. JBC 1995; 177(17): 4851-62 Rech S, et al. JBC 1996; 271(5): 2557-62.
 
    0.844
modC-3
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:TOBE domain.
 
  
 0.621
MMP0321
Conserved hypothetical archaeal protein.
       0.616
MMP0107
Hypothetical protein.
  
    0.583
MMP1518
Sulfate/molybdate ABC-transporter homolog, ATPase subunit.
 
  
 0.532
modC-2
Molybdenum transport ATP-binding protein modC; Citation: Maupin-Furlow JA, et al. JBC 1995; 177(17): 4851-62 Rech S, et al. JBC 1996; 271(5): 2557-62.
  
    0.488
MMP0551
Binding-protein-dependent transport systems inner membrane component.
  
  
 0.488
MMP0106
Conserved hypothetical protein.
  
    0.465
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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