STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afuB_1ABC-type transporter permease protein. (538 aa)    
Predicted Functional Partners:
MMP0108
ABC-type Iron(III)-binding periplasmic protein precursor.
 
 
 0.999
MMP0110
ABC transporter:AAA ATPase; Citation: Galagan, J.E. et al. Genome Res.12:532-542,2002.
 
 0.989
modC
Molybdenum transport ATP-binding protein modC; Citation: Maupin-Furlow JA, et al. JBC 1995; 177(17): 4851-62 Rech S, et al. JBC 1996; 271(5): 2557-62.
    0.751
modC-3
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:TOBE domain.
  
 0.623
MMP0107
Hypothetical protein.
  
    0.586
MMP0198
ABC-type iron(III) transport system, ATP binding protein.
  
  
 0.585
MMP0196
ABC-type iron(III) transport system, periplasmic binding protein.
 
  
 0.557
MMP0197
ABC-type iron(III) transport system, permease component.
  
  
 0.529
MMP1518
Sulfate/molybdate ABC-transporter homolog, ATPase subunit.
  
 0.515
MMP0551
Binding-protein-dependent transport systems inner membrane component.
  
  
 0.514
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.