STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0110ABC transporter:AAA ATPase; Citation: Galagan, J.E. et al. Genome Res.12:532-542,2002. (322 aa)    
Predicted Functional Partners:
afuB_1
ABC-type transporter permease protein.
 
 0.989
modB-2
Molybdenum transport system permease protein, modB RELATED; Citation: Self, W.T., et al. Res. Microbial. 2001(152): 311-321 Wang, SZ. et al. Biochem and Biophys Res Comm. 1990(169): 1122-1128.
 
 0.987
MMP1650
Probable amino acid ABC transporter, periplasmic component.
 
 0.968
MMP0108
ABC-type Iron(III)-binding periplasmic protein precursor.
 
  0.963
MMP1519
Anion transport system permease protein.
 
 0.926
modB
Molybdenum ABC transporter, permease protein; Citation: Maupin-Furlow JA, et al. JBC 1995; 177(17): 4851-62 Wang SZ, et al. Biochem and Biophys Res Comm 1990; 169(3): 1122-1128.
 
    0.889
MMP0551
Binding-protein-dependent transport systems inner membrane component.
 
 
 
  0.866
MMP0484
Possible sodium/proton antiporter.
   
    0.856
MMP0208
Conserved hypothetical protein; Contains 4Fe-4S motif.
   
    0.852
MMP0751
Conserved hypothetical archaeal protein.
   
    0.848
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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