Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fdhAFormate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol. 185:2548. (676 aa)    
Predicted Functional Partners:
fdhB
Formate dehydrogenase beta subunit.
  
 0.999
fdhB-2
Formate dehydrogenase beta subunit.
  
 0.993
fmdB-2
Molybdenum containing formylmethanofuran dehydrogenase, subunit B; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242:156-162.
 
 
0.990
fmdA
Formylmethanofuran dehydrogenase, subunit A; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242: 156-162.
  
 0.989
fmdB
Molybdenum containing formylmethanofuran dehydrogenase, subunit B; Contains selenocysteine; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242:156-162.
 
0.989
fmdC
Molybdenum containing formylmethanofuran dehydrogenase subunit C; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242: 156-162.
  
 
 0.972
fmdE-2
Molybdenum containing formylmethanofuran dehydrogenase, subunit E; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242:156-162.
  
 
 0.967
porF
Conserved archaeal protein, pyruvate oxidoreductase-associated; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.923
porE
Conserved archaeal protein, pyruvate oxidoreductase-associated; Putative electron transport protein for pyruvate oxidoreductase; Citation: Lin, WC et al, Arch Microbiol 179:444 (2003).
  
 
 0.923
cdhA
CO dehydrogenase/acetyl-CoA synthase complex subunit alpha; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
  
 
 0.921
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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