STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0152Cation transporter. (446 aa)    
Predicted Functional Partners:
MMP1430
Putative TRK system cation (K+) uptake protein; Citation: J Bacteriol. 1995 Apr;177(7):1908-10; Microbiol. 1998 144:2281-2289.
 
  
 0.621
trkA
Trk system potassium uptake protein A; Citation: Macario, A.J.L., Dugan, C.B., and Conway de Macario, E. 1216:495-498,1994.
 
  
 0.597
frdA
Fumarate reductase/succinate dehydrogenase, flavoprotein subunit.
  
  
 0.583
potE
Amino acid/ polyamine transporter; Citation: (1993) Protein Sci. 2: 20-30.
  
 
 0.568
htpX
Peptidase family M48; Belongs to the peptidase M48B family.
  
  
 0.496
MMP0707
Na+/H+ exchanger.
 
  
 0.480
cobA
uroporphyrin-III C-methyltransferase; Citation: J Bacteriol. 1991 Aug;173(15):4637-45; Belongs to the precorrin methyltransferase family.
  
  
 0.477
rpl40e
LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 
 0.470
MMP1092
Conserved hypothetical protein.
  
   0.455
MMP0089
Conserved hypothetical protein.
  
  
 0.443
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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