Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMP0167ABC transporter ATP binding protein family member. (322 aa)    
Predicted Functional Partners:
MMP0165
ABC transporter, family 2.
  
 0.994
MMP0168
Transcriptional regulator PadR-like family.
  
  
 0.994
MMP0166
MatE family member (drug/sodium antiporters).
  
  
 0.977
rncS
Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain.
 
 
 0.713
nth1
Endonuclease III homologue; Citation: Nucleic Acids Res. (2001) 29: 604-613.
     
 0.687
MMP0169
Conserved hypothetical protein.
  
  
 0.667
atpK
A1A0 ATPase, subunit K; Citation: Extremophiles 7:249.
  
 
 0.665
MMP1581
Putative DNA helicase.
   
 
 0.660
rpsC
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
   0.644
MMP0520
Cation transport ATPase.
  
 
 0.622
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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